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add phynest#621

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alxndrdiaz wants to merge 1 commit into
BioContainers:masterfrom
alxndrdiaz:phynest
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add phynest#621
alxndrdiaz wants to merge 1 commit into
BioContainers:masterfrom
alxndrdiaz:phynest

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@alxndrdiaz

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Submitting a Container

(If you're requesting for a new container, please check the procedure described here.

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Checklist

  1. Misc
  • My tool doesn't exist in BioConda
  • The image can be built
  1. Metadata
  • LABEL base_image
  • LABEL version
  • LABEL software.version
  • LABEL about.summary
  • LABEL about.home
  • LABEL about.license
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  1. Extra (optionals)
  • I have written tests in test-cmds.txt
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No test-cmds.txt (test file) present, skipping tests

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Pull request overview

This PR adds a new BioContainers image definition for PhyNEST 0.1.12 by introducing a Dockerfile under the standard tool/version/ layout.

Changes:

  • Added phynest/0.1.12/Dockerfile using the biocontainers/biocontainers:v1.0.0_cv5 base image.
  • Included BioContainers metadata labels (software, version, homepage, license, etc.).
  • Installs Julia via juliaup and adds the PhyNEST Julia package at version 0.1.12.

Comment thread phynest/0.1.12/Dockerfile
Comment on lines +19 to +23
RUN curl -fsSL https://install.julialang.org | sh -s -- -y

ENV PATH="/home/biodocker/.juliaup/bin:$PATH"

RUN julia -e 'using Pkg; Pkg.add(name="PhyNEST", version="0.1.12")' No newline at end of file
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3 participants